Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK82238.1Predicted metallopeptidase, M23 family; Signal peptide. (410 aa)    
Predicted Functional Partners:
pbpA2
PbpA2: penicillin-binding protein 1A.
  
   
 0.721
pbpA4
PbpA4: penicillin-binding protein 1A; Signal peptide.
  
   
 0.629
pbpA
PbpA: penicillin-binding protein 1A; Signal peptide.
  
   
 0.608
uppP
UppP: Undecaprenyl-diphosphatase (Bacitracin resistance protein); Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
 
  
 0.577
CCK80354.1
Predicted signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.571
CCK80356.1
Peptidase, M23 family.
  
     0.509
CCK81789.1
Predicted polyketide synthase.
  
    0.492
cpoB
Predicted tetratricopeptide domain protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
    0.469
lcfB6
LcfB6: long-chain-fatty-acid--CoA ligase.
       0.444
fliM
FliM: flagellar motor switch protein.
    
 
 0.420
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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