Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CCK82252.1Diguanylate cyclase (GGDEF) domain protein. (354 aa)    
Predicted Functional Partners:
CCK78502.1
Response regulator.
 
  
 0.933
phoB
PhoB: phosphate regulon transcriptional regulatory protein.
 
 
  
 0.904
CCK81751.1
Response regulator receiver modulated metal-dependent phosphohydrolase.
 
 0.902
CCK79040.1
Response regulator receiver protein.
 
  
 0.899
CCK79771.1
Conserved uncharacterized protein.
  
   0.873
CCK79174.1
Two component system response regulator.
 
 
  
 0.872
amt
Amt: ammonium transporter; Signal peptide.
 
      0.800
CCK79499.1
Response regulator receiver modulated metal-dependent phosphohydrolase.
  
  
 0.785
CCK81346.1
Predicted EAL/GGDEF domain signaling protein.
 
  
 0.785
CCK78693.1
Uncharacterized sensor protein with receiver region.
 
 0.776
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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