Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCK79898.1 | CCK82272.1 | TOL2_C17370 | TOL2_C41160 | Predicted flavodoxin/nitric oxide synthase. | Bacteriaohaemerythrin. | 0.532 |
CCK81399.1 | CCK82272.1 | TOL2_C32420 | TOL2_C41160 | CheC domain protein. | Bacteriaohaemerythrin. | 0.427 |
CCK81399.1 | CCK82273.1 | TOL2_C32420 | TOL2_C41170 | CheC domain protein. | Two component system sensor histidine kinase, hybrid. | 0.510 |
CCK81399.1 | fliM | TOL2_C32420 | TOL2_C35760 | CheC domain protein. | FliM: flagellar motor switch protein. | 0.977 |
CCK82272.1 | CCK79898.1 | TOL2_C41160 | TOL2_C17370 | Bacteriaohaemerythrin. | Predicted flavodoxin/nitric oxide synthase. | 0.532 |
CCK82272.1 | CCK81399.1 | TOL2_C41160 | TOL2_C32420 | Bacteriaohaemerythrin. | CheC domain protein. | 0.427 |
CCK82272.1 | CCK82273.1 | TOL2_C41160 | TOL2_C41170 | Bacteriaohaemerythrin. | Two component system sensor histidine kinase, hybrid. | 0.796 |
CCK82272.1 | CCK82274.1 | TOL2_C41160 | TOL2_C41180 | Bacteriaohaemerythrin. | Two component system response regulator, sigma54-specific. | 0.757 |
CCK82272.1 | CCK82275.1 | TOL2_C41160 | TOL2_C41190 | Bacteriaohaemerythrin. | Uncharacterized protein. | 0.404 |
CCK82272.1 | fliM | TOL2_C41160 | TOL2_C35760 | Bacteriaohaemerythrin. | FliM: flagellar motor switch protein. | 0.424 |
CCK82272.1 | rocD | TOL2_C41160 | TOL2_C41150 | Bacteriaohaemerythrin. | RocD: ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.454 |
CCK82272.1 | roo | TOL2_C41160 | TOL2_C17430 | Bacteriaohaemerythrin. | Roo: rubredoxin-oxygen oxidoreductase. | 0.532 |
CCK82273.1 | CCK81399.1 | TOL2_C41170 | TOL2_C32420 | Two component system sensor histidine kinase, hybrid. | CheC domain protein. | 0.510 |
CCK82273.1 | CCK82272.1 | TOL2_C41170 | TOL2_C41160 | Two component system sensor histidine kinase, hybrid. | Bacteriaohaemerythrin. | 0.796 |
CCK82273.1 | CCK82274.1 | TOL2_C41170 | TOL2_C41180 | Two component system sensor histidine kinase, hybrid. | Two component system response regulator, sigma54-specific. | 0.842 |
CCK82273.1 | CCK82275.1 | TOL2_C41170 | TOL2_C41190 | Two component system sensor histidine kinase, hybrid. | Uncharacterized protein. | 0.404 |
CCK82273.1 | fliM | TOL2_C41170 | TOL2_C35760 | Two component system sensor histidine kinase, hybrid. | FliM: flagellar motor switch protein. | 0.754 |
CCK82273.1 | rocD | TOL2_C41170 | TOL2_C41150 | Two component system sensor histidine kinase, hybrid. | RocD: ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.435 |
CCK82274.1 | CCK82272.1 | TOL2_C41180 | TOL2_C41160 | Two component system response regulator, sigma54-specific. | Bacteriaohaemerythrin. | 0.757 |
CCK82274.1 | CCK82273.1 | TOL2_C41180 | TOL2_C41170 | Two component system response regulator, sigma54-specific. | Two component system sensor histidine kinase, hybrid. | 0.842 |
page 1 of 2