STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK82272.1Bacteriaohaemerythrin. (137 aa)    
Predicted Functional Partners:
CCK82273.1
Two component system sensor histidine kinase, hybrid.
  
    0.796
CCK82274.1
Two component system response regulator, sigma54-specific.
       0.757
CCK79898.1
Predicted flavodoxin/nitric oxide synthase.
  
  
 0.532
roo
Roo: rubredoxin-oxygen oxidoreductase.
  
  
 0.532
rocD
RocD: ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
   0.454
CCK81399.1
CheC domain protein.
   
   0.427
fliM
FliM: flagellar motor switch protein.
    
   0.424
CCK82275.1
Uncharacterized protein.
       0.404
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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