Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK82278.1Conserved uncharacterized protein, DUF1538; Signal anchor. (264 aa)    
Predicted Functional Partners:
CCK82279.1
Putative regulatory protein, related to nitrogen regulatory protein PII family proteins.
 
     0.957
CCK82280.1
CBS domain protein.
 
     0.924
CCK82277.1
Conserved uncharacterized protein, DUF1538.
 
    
0.797
CCK80527.1
Conserved uncharacterized protein.
  
    0.503
CCK79784.1
Phosphoribosyl transferase.
   
    0.430
apt
Apt: adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.421
tyrA
TyrA: T-protein [includes: chorismate mutase; prephenate dehydrogenase].
  
    0.418
CCK82276.1
Methyl-accepting chemotaxis sensory transducer.
       0.400
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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