STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bamB2BamB2: tungsten-containing aldehyde:ferredoxin oxidoreductase. (675 aa)    
Predicted Functional Partners:
bamC2
BamC2: 4Fe-4S ferredoxin.
 
 
 0.967
bamC1
BamC1: 4Fe-4S ferredoxin.
 
 
 0.926
CCK82302.1
4Fe-4S ferredoxin iron-sulfur binding protein.
 
 
 0.906
bamC3
BamC3: 4Fe-4S ferredoxin.
 
 
 
 0.881
bamE2
BamE2: predicted heterodisulfide reductase, iron-sulfur subunit A.
 
     0.729
bamD2
BamD2: putative heterodisulfide reductase, subunit B.
 
 
   0.699
bamF1
BamF1:coenzyme F420 non-reducing hydrogenase, delta subunit.
  
     0.654
bamF3
BamF3: DNA-binding domain modulated methyl-viologen-reducing hydrogenase, delta subunit.
  
     0.654
oah
Oah: predicted 6-oxo-cyclohex-1-ene-carbonyl-CoA hydrolase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.619
had
Had: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase.
  
   
 0.598
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.