Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aor8Aor8: tungsten-containing aldehyde:ferredoxin oxidoreductase. (675 aa)    
Predicted Functional Partners:
CCK82302.1
4Fe-4S ferredoxin iron-sulfur binding protein.
 
 
 0.960
bamC1
BamC1: 4Fe-4S ferredoxin.
 
 
 0.881
bamC3
BamC3: 4Fe-4S ferredoxin.
 
 
 
 0.863
bamC2
BamC2: 4Fe-4S ferredoxin.
 
 
 0.848
bamH1
BamH1: NADH-quinone oxidoreductase, subunit F.
    
   0.793
bamH3
BamH3: NADH-quinone oxidoreductase, subunit F.
    
   0.793
bamF1
BamF1:coenzyme F420 non-reducing hydrogenase, delta subunit.
  
     0.661
bamF3
BamF3: DNA-binding domain modulated methyl-viologen-reducing hydrogenase, delta subunit.
  
     0.661
oah
Oah: predicted 6-oxo-cyclohex-1-ene-carbonyl-CoA hydrolase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
   
 0.629
had
Had: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase.
  
   
 0.611
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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