Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCK78453.1 | padB2 | TOL2_C02830 | TOL2_C41620 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.875 |
| CCK79930.1 | CCK82334.1 | TOL2_C17690 | TOL2_C41780 | 4Fe-4S ferredoxin iron-sulfur binding domain protein; Signal peptide. | 4Fe-4S ferredoxin iron-sulfur binding protein; Signal peptide. | 0.753 |
| CCK79930.1 | padB2 | TOL2_C17690 | TOL2_C41620 | 4Fe-4S ferredoxin iron-sulfur binding domain protein; Signal peptide. | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.804 |
| CCK80054.1 | CCK82334.1 | TOL2_C18930 | TOL2_C41780 | Predicted molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit. | 4Fe-4S ferredoxin iron-sulfur binding protein; Signal peptide. | 0.611 |
| CCK80054.1 | padB2 | TOL2_C18930 | TOL2_C41620 | Predicted molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit. | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.830 |
| CCK81389.1 | padB2 | TOL2_C32320 | TOL2_C41620 | Predicted glutamate synthase, small subunit. | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.785 |
| CCK81389.1 | padI2 | TOL2_C32320 | TOL2_C41610 | Predicted glutamate synthase, small subunit. | PadI2: phenylglyoxylate:acceptor oxidoreductase, subunit I. | 0.586 |
| CCK82334.1 | CCK79930.1 | TOL2_C41780 | TOL2_C17690 | 4Fe-4S ferredoxin iron-sulfur binding protein; Signal peptide. | 4Fe-4S ferredoxin iron-sulfur binding domain protein; Signal peptide. | 0.753 |
| CCK82334.1 | CCK80054.1 | TOL2_C41780 | TOL2_C18930 | 4Fe-4S ferredoxin iron-sulfur binding protein; Signal peptide. | Predicted molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit. | 0.611 |
| CCK82334.1 | dsrO | TOL2_C41780 | TOL2_C34150 | 4Fe-4S ferredoxin iron-sulfur binding protein; Signal peptide. | DsrO: predicted redox complex linked to DsrAB, iron-sulfur binding subunit; Signal peptide. | 0.756 |
| CCK82334.1 | padB2 | TOL2_C41780 | TOL2_C41620 | 4Fe-4S ferredoxin iron-sulfur binding protein; Signal peptide. | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.788 |
| dsrO | CCK82334.1 | TOL2_C34150 | TOL2_C41780 | DsrO: predicted redox complex linked to DsrAB, iron-sulfur binding subunit; Signal peptide. | 4Fe-4S ferredoxin iron-sulfur binding protein; Signal peptide. | 0.756 |
| dsrO | padB2 | TOL2_C34150 | TOL2_C41620 | DsrO: predicted redox complex linked to DsrAB, iron-sulfur binding subunit; Signal peptide. | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.859 |
| padB2 | CCK78453.1 | TOL2_C41620 | TOL2_C02830 | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 4Fe-4S ferredoxin, iron-sulfur binding protein. | 0.875 |
| padB2 | CCK79930.1 | TOL2_C41620 | TOL2_C17690 | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 4Fe-4S ferredoxin iron-sulfur binding domain protein; Signal peptide. | 0.804 |
| padB2 | CCK80054.1 | TOL2_C41620 | TOL2_C18930 | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Predicted molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit. | 0.830 |
| padB2 | CCK81389.1 | TOL2_C41620 | TOL2_C32320 | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Predicted glutamate synthase, small subunit. | 0.785 |
| padB2 | CCK82334.1 | TOL2_C41620 | TOL2_C41780 | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 4Fe-4S ferredoxin iron-sulfur binding protein; Signal peptide. | 0.788 |
| padB2 | dsrO | TOL2_C41620 | TOL2_C34150 | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | DsrO: predicted redox complex linked to DsrAB, iron-sulfur binding subunit; Signal peptide. | 0.859 |
| padB2 | padC1 | TOL2_C41620 | TOL2_C02330 | PadB2: phenylacetyl-CoA:acceptor oxidoreductase, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | PadC1: phenylacetyl-CoA:acceptor oxidoreductase, subunit C. | 0.904 |
page 1 of 2