Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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fdhD3FdhD3: formate dehydrogenase family accessory proten; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. (263 aa)    
Predicted Functional Partners:
fdhA3
FdhA3: formate dehydrogenase, subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.712
fdhD2
fdhD2: formate dehydrogenase family accessory protein; Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family.
  
  
 
0.637
iscS
IscS: cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
 0.628
bamH1
BamH1: NADH-quinone oxidoreductase, subunit F.
  
  
 0.605
bamH3
BamH3: NADH-quinone oxidoreductase, subunit F.
  
  
 0.605
mobB
MobB: molybdopterin-guanine dinucleotide biosynthesis protein B.
  
    0.597
CCK82331.1
Molybdopterin binding domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
     
 0.562
bamL
BamL: formate dehydrogenase, subunit D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
  
  
 
0.525
moaA
MoaA: molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
  
 0.457
CCK82334.1
4Fe-4S ferredoxin iron-sulfur binding protein; Signal peptide.
     
 0.451
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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