Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK82341.1TonB-dependent receptor; Signal peptide. (693 aa)    
Predicted Functional Partners:
CCK82340.1
Transcriptional regulator, AraC family.
 
   
 0.761
CCK82342.1
O-methyltransferase, family II.
 
     0.759
CCK82113.1
TonB-dependent receptor; Signal peptide.
  
  
 0.758
CCK82358.1
TonB-dependent receptor; Signal peptide.
  
   
 0.758
CCK81469.1
Conserved uncharacterized protein; Signal peptide.
  
    0.702
CCK81586.1
Predicted TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.693
tonB
TonB: TonB family protein, associated with ExbBD; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.691
CCK81447.1
Transcriptional regulator, AraC family.
  
   
 0.651
CCK82343.1
Periplasmic binding protein.
  
  
 0.613
CCK79086.1
Putative transcriptional regulator, AraC family.
  
   
 0.592
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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