Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK82349.1TonB-dependent receptor; Signal peptide. (678 aa)    
Predicted Functional Partners:
CCK82358.1
TonB-dependent receptor; Signal peptide.
 
   
 0.780
CCK81272.1
Conserved uncharacterized protein; Signal anchor.
  
 0.683
CCK81271.1
Conserved uncharacterized protein; Signal anchor.
 
  
 0.663
CCK82363.1
Predicted adenosylcobinamide amidohydrolase.
 
     0.643
CCK81586.1
Predicted TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.623
CCK81590.1
Periplasmic binding protein modulated with adenosylcobinamide aminohydrolase, CbiZ; Signal peptide.
 
  
 0.618
tonB
TonB: TonB family protein, associated with ExbBD; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.613
CCK81593.1
Conserved uncharacterized protein; Signal anchor.
  
 0.602
CCK81829.1
Amino acid adenylation domain protein.
  
  
 0.593
tolA
TolA: putative TonB family protein.
 
 
 0.571
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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