Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK82352.1Conserved uncharacterized protein. (286 aa)    
Predicted Functional Partners:
CCK82351.1
Cytochrome c assembly protein.
  
  
 0.918
CCK82353.1
ABC transport system, periplasmic binding protein; Signal peptide.
       0.790
cobA
CobA: uroporphyrinogen-III C-methyltransferase.
  
    0.762
ccmC
CcmC: cytochrome c assembly protein.
  
  
 0.647
ccsA
CcsA: cytochrome c biogenesis protein; Signal peptide.
  
  
 0.647
CCK82350.1
Cobaltochelatase.
  
    0.635
CCK82354.1
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.546
CCK82355.1
ABC transporter, ATP-binding protein.
       0.546
ccdA
CcdA: cytochrome c-type biogenesis protein; Signal anchor.
  
  
 0.537
CCK82358.1
TonB-dependent receptor; Signal peptide.
       0.522
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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