Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK82360.1Magnesium chelatase. (349 aa)    
Predicted Functional Partners:
CCK82359.1
Magnesium chelatase.
 
0.987
cobN-2
CobN: hydrogenobyrinic acid a,c-diamide cobaltochelatase.
 
  
 0.928
CCK82350.1
Cobaltochelatase.
 
  
 0.907
cobN
CobN: hydrogenobyrinic acid a,c-diamide cobaltochelatase.
 
  
 0.876
CCK81270.1
Predicted hydrogenobyrinic acid a,c-diamide cobaltochelatase.
 
  
 0.872
CCK82362.1
ABC2-type transporter, permease protein.
 
     0.762
CCK81012.1
Geranylgeranyl reductase.
 
  
 0.761
CCK82361.1
ABC transporter, ATP-binding protein, related to Nod factor export.
      0.759
CCK79707.1
Conserved uncharacterized protein, von Willebrand factor; Signal peptide.
  
 
 0.714
CCK79708.1
Von Willebrand factor, tetratricopeptide domain protein.
  
 
 0.714
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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