Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK82368.1Predicted membrane efflux protein, MFS. (380 aa)    
Predicted Functional Partners:
CCK81789.1
Predicted polyketide synthase.
 
  
 0.622
CCK82369.1
Uncharacterized protein.
       0.572
CCK82367.1
Predicted RNA methylase; Belongs to the methyltransferase superfamily.
       0.532
CCK79631.1
Conserved uncharacterized protein.
  
     0.505
CCK81829.1
Amino acid adenylation domain protein.
  
  
 0.498
ydhH
YdhH: predicted quinone oxidoreductase.
     
 0.466
CCK78246.1
Conserved uncharacterized protein.
  
   
 0.429
CCK82093.1
Conserved uncharacterized protein; Signal peptide.
  
     0.422
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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