Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK82391.1Conserved uncharacterized protein, DUF1178. (143 aa)    
Predicted Functional Partners:
CCK82392.1
Na/phosphate-cotransporter family protein.
       0.773
rpsU
RspU: 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
     0.564
CCK79216.1
Conserved uncharacterized protein.
  
     0.497
CCK82393.1
Cobalamin-binding radical SAM domain protein.
       0.473
CCK82394.1
Putative transcriptional regulator, AsnC family.
       0.473
mltA
MltA: membrane-bound lytic murein transglycosylase A homolog (murein hydrolase A).
  
     0.456
CCK82390.1
OmpA/MotB domain protein; Signal peptide.
       0.419
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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