STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpACtpA: carboxy-terminal-processing protease; Signal peptide; Belongs to the peptidase S41A family. (456 aa)    
Predicted Functional Partners:
CCK82444.1
Predicted metallopeptidase, M23 family.
 
  
 0.922
CCK82446.1
Conserved uncharacterized protein, DUF610.
       0.828
CCK81670.1
Tetratricopeptide repeat domain protein, DUF115.
    
 
 0.787
nifJ
NifJ: pyruvate-flavodoxin oxidoreductase.
   
   0.667
rseP
RseP: predicted membrane-associated zinc metallprotease; Signal peptide.
 
  
 0.615
pycB
PycB: pyruvate carboxylase, subunit B.
 
    0.603
ftsX
FtsX: cell division protein, predicted permease; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.594
CCK78258.1
Uncharacterized protein related to S-layer proteins; Signal peptide.
  
 
 0.592
CCK78763.1
Uncharacterized protein, related to lipoprotein; Signal peptide.
  
 
 0.592
CCK81055.1
Uncharacterized protein.
  
 
 0.592
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.