Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK82466.1Uncharacterized protein; Signal peptide. (483 aa)    
Predicted Functional Partners:
CCK82467.1
Conserved uncharacterized protein; Signal peptide.
 
    0.940
CCK82468.1
Conserved uncharacterized membrane protein.
 
     0.934
CCK81472.1
Conserved uncharacterized protein; Signal peptide.
 
     0.777
CCK81470.1
Putative membrane protein.
 
     0.776
CCK80463.1
Conserved uncharacterized protein; Signal peptide.
 
     0.761
CCK82309.1
Conserved uncharacterized protein; Signal peptide.
  
     0.761
CCK80461.1
Conserved uncharacterized protein.
 
     0.695
CCK80464.1
Uncharacterized protein.
  
     0.659
CCK80627.1
Predicted integral membrane protein, associated with toluene tolerance protein.
 
     0.547
CCK78893.1
Conserved uncharacterized protein; Signal peptide.
 
     0.482
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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