STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK82480.1Conserved uncharacterized protein, related to nfeD; Signal anchor. (158 aa)    
Predicted Functional Partners:
CCK82479.1
Conserved uncharacterized protein, UPF0365; Signal anchor.
 
  
 0.982
CCK82481.1
Conserved uncharacterized protein, related to nfeD; Signal peptide.
 
    
0.827
CCK82478.1
Uncharacterized protein.
       0.520
yqiJ
YqiJ: putative inner membrane protein; Signal peptide.
  
    0.495
CCK82482.1
FMN-binding protein, related to pyridoxamine 5?-phosphate oxidase.
       0.493
yqiK
YqiK: predicted inner membrane protein; Signal peptide.
  
    0.481
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.