Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bamF3BamF3: DNA-binding domain modulated methyl-viologen-reducing hydrogenase, delta subunit. (213 aa)    
Predicted Functional Partners:
bamE3
BamE3: predicted heterodisulfide reductase, iron-sulfur subunit A.
 
   0.906
CCK82511.1
Uncharacterized protein related to FAD-dependent oxidase.
 
 
 0.892
bamE1
BamE1: predicted heterodisulfide reductase, iron-sulfur subunit A.
 
 
 0.844
hdlA9
HdlA9: heterodisulfide reductase-like protein, iron-sulfur subunit.
 
 
 0.843
bamE2
BamE2: predicted heterodisulfide reductase, iron-sulfur subunit A.
 
 
 0.843
CCK78546.1
Uncharacterized protein related to FAD dependent oxidase.
 
 
 0.836
CCK79325.1
Predicted flavoprotein, associated with oxidoreductase TOL2_11570.
 
 
 0.834
CCK79322.1
Flavoprotein associated with putative oxidoreductase TOL2_11570.
 
 
 0.829
hdlA3?
HdlA3?: heterodisulfide reductase-like protein, iron-sulfur subunit, fragment.
 
 
 0.829
hdlA8
HdlA8: heterodisulfide reductase-like protein, iron-sulfur subunit.
 
 
 0.805
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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