Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB43557.1 | SKB43567.1 | SAMN05660293_00125 | SAMN05660293_00126 | Glyoxylase, beta-lactamase superfamily II. | Protein of unknown function. | 0.764 |
SKB43557.1 | SKB43572.1 | SAMN05660293_00125 | SAMN05660293_00127 | Glyoxylase, beta-lactamase superfamily II. | Rhodanese-like domain-containing protein. | 0.881 |
SKB43557.1 | SKB43578.1 | SAMN05660293_00125 | SAMN05660293_00128 | Glyoxylase, beta-lactamase superfamily II. | Hypothetical protein. | 0.776 |
SKB43557.1 | SKB80896.1 | SAMN05660293_00125 | SAMN05660293_02267 | Glyoxylase, beta-lactamase superfamily II. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.787 |
SKB43557.1 | SKC01080.1 | SAMN05660293_00125 | SAMN05660293_03573 | Glyoxylase, beta-lactamase superfamily II. | Rhodanese-related sulfurtransferase. | 0.416 |
SKB43557.1 | SKC09872.1 | SAMN05660293_00125 | SAMN05660293_04165 | Glyoxylase, beta-lactamase superfamily II. | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | 0.930 |
SKB43557.1 | nadE | SAMN05660293_00125 | SAMN05660293_03217 | Glyoxylase, beta-lactamase superfamily II. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.716 |
SKB43557.1 | rplQ | SAMN05660293_00125 | SAMN05660293_04515 | Glyoxylase, beta-lactamase superfamily II. | Large subunit ribosomal protein L17. | 0.645 |
SKB43557.1 | rpsQ | SAMN05660293_00125 | SAMN05660293_04533 | Glyoxylase, beta-lactamase superfamily II. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.979 |
SKB43557.1 | ybeY | SAMN05660293_00125 | SAMN05660293_05434 | Glyoxylase, beta-lactamase superfamily II. | rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.989 |
SKB43567.1 | SKB43557.1 | SAMN05660293_00126 | SAMN05660293_00125 | Protein of unknown function. | Glyoxylase, beta-lactamase superfamily II. | 0.764 |
SKB43567.1 | SKB43572.1 | SAMN05660293_00126 | SAMN05660293_00127 | Protein of unknown function. | Rhodanese-like domain-containing protein. | 0.790 |
SKB43567.1 | SKB43578.1 | SAMN05660293_00126 | SAMN05660293_00128 | Protein of unknown function. | Hypothetical protein. | 0.736 |
SKB43572.1 | SKB43557.1 | SAMN05660293_00127 | SAMN05660293_00125 | Rhodanese-like domain-containing protein. | Glyoxylase, beta-lactamase superfamily II. | 0.881 |
SKB43572.1 | SKB43567.1 | SAMN05660293_00127 | SAMN05660293_00126 | Rhodanese-like domain-containing protein. | Protein of unknown function. | 0.790 |
SKB43572.1 | SKB43578.1 | SAMN05660293_00127 | SAMN05660293_00128 | Rhodanese-like domain-containing protein. | Hypothetical protein. | 0.734 |
SKB43572.1 | SKB80896.1 | SAMN05660293_00127 | SAMN05660293_02267 | Rhodanese-like domain-containing protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.712 |
SKB43572.1 | SKC01080.1 | SAMN05660293_00127 | SAMN05660293_03573 | Rhodanese-like domain-containing protein. | Rhodanese-related sulfurtransferase. | 0.651 |
SKB43572.1 | SKC09872.1 | SAMN05660293_00127 | SAMN05660293_04165 | Rhodanese-like domain-containing protein. | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | 0.638 |
SKB43572.1 | nadE | SAMN05660293_00127 | SAMN05660293_03217 | Rhodanese-like domain-containing protein. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.676 |
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