STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB43988.1Hypothetical protein. (723 aa)    
Predicted Functional Partners:
SKB83447.1
Signal transduction histidine kinase.
 
0.996
SKB73724.1
PAS domain S-box-containing protein.
 
0.987
SKC17847.1
PAS domain S-box-containing protein.
 
 0.987
SKC06337.1
Signal transduction histidine kinase.
  
0.976
SKB72525.1
PAS domain S-box-containing protein.
 
0.964
SKB92397.1
PAS domain S-box-containing protein.
  
0.963
SKB43976.1
Hypothetical protein.
 
     0.951
SKB43996.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
0.945
SKB43963.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
 
     0.940
SKB76818.1
CheB methylesterase.
   
 0.937
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.