STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB45325.1MoxR-like ATPase. (320 aa)    
Predicted Functional Partners:
SKC16666.1
Protein of unknown function DUF58.
 
  
 0.816
SKB46340.1
Protein of unknown function DUF58.
 
  
 0.807
SKB57545.1
Protein of unknown function DUF58.
 
  
 0.785
SKB45335.1
NADP-dependent aldehyde dehydrogenase.
       0.737
SKC16670.1
Ca-activated chloride channel family protein.
 
 
 0.689
SKB45314.1
Periplasmic chaperone for outer membrane proteins SurA.
       0.651
SKB46516.1
Ca-activated chloride channel family protein.
 
     0.641
SKB46292.1
Hypothetical protein.
    
 0.632
SKC04175.1
Magnesium chelatase subunit D.
  
 
 0.592
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.552
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.