STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB45591.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
SKB45610.1
PAS domain S-box-containing protein.
       0.608
SKB45622.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
       0.492
SKB82701.1
Sugar phosphate isomerase/epimerase.
  
     0.475
SKB86075.1
Mn-containing catalase.
  
     0.474
SKB98306.1
Hypothetical protein.
  
     0.463
SKC16576.1
Hypothetical protein.
  
     0.459
SKC00852.1
Hypothetical protein.
  
     0.423
SKB81960.1
Response regulator receiver domain-containing protein.
  
     0.419
SKB47546.1
FHA domain-containing protein.
  
     0.417
SKB93743.1
CarboxypepD_reg-like domain-containing protein.
  
     0.415
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.