Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB47522.1 | SKB47534.1 | SAMN05660293_00408 | SAMN05660293_00409 | TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Protein phosphatase. | 0.966 |
SKB47522.1 | SKB77545.1 | SAMN05660293_00408 | SAMN05660293_02072 | TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Serine/threonine protein kinase. | 0.769 |
SKB47534.1 | SKB47522.1 | SAMN05660293_00409 | SAMN05660293_00408 | Protein phosphatase. | TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.966 |
SKB47534.1 | SKB48155.1 | SAMN05660293_00409 | SAMN05660293_00455 | Protein phosphatase. | DKNYY family protein. | 0.975 |
SKB47534.1 | SKB77545.1 | SAMN05660293_00409 | SAMN05660293_02072 | Protein phosphatase. | Serine/threonine protein kinase. | 0.903 |
SKB47534.1 | SKB84724.1 | SAMN05660293_00409 | SAMN05660293_02571 | Protein phosphatase. | DKNYY family protein. | 0.975 |
SKB47534.1 | SKC06603.1 | SAMN05660293_00409 | SAMN05660293_03975 | Protein phosphatase. | Ribose-phosphate pyrophosphokinase. | 0.936 |
SKB47534.1 | SKC10143.1 | SAMN05660293_00409 | SAMN05660293_04198 | Protein phosphatase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.947 |
SKB47534.1 | SKC10340.1 | SAMN05660293_00409 | SAMN05660293_04214 | Protein phosphatase. | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | 0.996 |
SKB47534.1 | SKC10713.1 | SAMN05660293_00409 | SAMN05660293_04279 | Protein phosphatase. | Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.953 |
SKB47534.1 | SKC17995.1 | SAMN05660293_00409 | SAMN05660293_05232 | Protein phosphatase. | DKNYY family protein. | 0.975 |
SKB47534.1 | gcvT | SAMN05660293_00409 | SAMN05660293_01376 | Protein phosphatase. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.903 |
SKB48155.1 | SKB47534.1 | SAMN05660293_00455 | SAMN05660293_00409 | DKNYY family protein. | Protein phosphatase. | 0.975 |
SKB77545.1 | SKB47522.1 | SAMN05660293_02072 | SAMN05660293_00408 | Serine/threonine protein kinase. | TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.769 |
SKB77545.1 | SKB47534.1 | SAMN05660293_02072 | SAMN05660293_00409 | Serine/threonine protein kinase. | Protein phosphatase. | 0.903 |
SKB84724.1 | SKB47534.1 | SAMN05660293_02571 | SAMN05660293_00409 | DKNYY family protein. | Protein phosphatase. | 0.975 |
SKC06603.1 | SKB47534.1 | SAMN05660293_03975 | SAMN05660293_00409 | Ribose-phosphate pyrophosphokinase. | Protein phosphatase. | 0.936 |
SKC06603.1 | SKC10143.1 | SAMN05660293_03975 | SAMN05660293_04198 | Ribose-phosphate pyrophosphokinase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.996 |
SKC06603.1 | SKC10340.1 | SAMN05660293_03975 | SAMN05660293_04214 | Ribose-phosphate pyrophosphokinase. | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | 0.997 |
SKC06603.1 | gcvT | SAMN05660293_03975 | SAMN05660293_01376 | Ribose-phosphate pyrophosphokinase. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.896 |
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