STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB48155.1DKNYY family protein. (341 aa)    
Predicted Functional Partners:
SKB52473.1
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
    
 0.994
SKB47534.1
Protein phosphatase.
   
 0.975
SKB60603.1
Uridine kinase.
    
 0.955
SKB72235.1
ATPase family associated with various cellular activities (AAA).
   
 0.902
SKB83760.1
Adenylate cyclase, class 3.
    
 0.880
SKB43864.1
PDZ domain-containing protein.
   
 0.875
SKB59301.1
FKBP-type peptidyl-prolyl cis-trans isomerase FklB.
    
 0.858
SKC10369.1
FKBP-type peptidyl-prolyl cis-trans isomerase.
    
 0.858
SKC12994.1
FKBP-type peptidyl-prolyl cis-trans isomerase.
    
 0.858
SKB80181.1
Protein-tyrosine phosphatase.
    
   0.823
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.