STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB51751.1Histidine kinase. (366 aa)    
Predicted Functional Partners:
SKB51738.1
Two component transcriptional regulator, LytTR family.
 
  0.964
SKB51798.1
Two component transcriptional regulator, LytTR family.
 
  0.897
SKB81378.1
Two component transcriptional regulator, LytTR family.
  
  0.835
SKB99584.1
Two component transcriptional regulator, LytTR family.
  
  0.835
SKC05391.1
Two component transcriptional regulator, LytTR family.
  
  0.835
SKC13856.1
Two component transcriptional regulator, LytTR family.
  
  0.835
SKB42571.1
Two component transcriptional regulator, LytTR family.
  
  0.834
SKB82541.1
Two component transcriptional regulator, LytTR family.
  
  0.834
SKC05149.1
Two component transcriptional regulator, LytTR family.
  
  0.834
SKC09239.1
Two component transcriptional regulator, LytTR family.
  
  0.834
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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