STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB54570.1Sugar phosphate isomerase/epimerase. (294 aa)    
Predicted Functional Partners:
SKB48594.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
 
 
 0.719
SKC15729.1
Predicted dehydrogenase.
  
 
  0.676
SKB54575.1
Alpha/beta hydrolase family protein.
       0.673
SKB53980.1
Predicted dehydrogenase.
  
 
  0.651
SKB60446.1
Predicted dehydrogenase.
  
 
  0.616
SKB58041.1
Predicted dehydrogenase.
  
 
  0.606
SKC07007.1
Predicted dehydrogenase.
  
 
  0.589
SKC15724.1
Predicted dehydrogenase.
  
 
  0.585
SKC09432.1
Predicted dehydrogenase.
  
 
  0.571
SKC15611.1
Predicted dehydrogenase.
   
 
  0.568
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.