Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB52403.1 | SKB54433.1 | SAMN05660293_00740 | SAMN05660293_00893 | LPS export ABC transporter protein LptC. | Penicillin-binding protein 1A. | 0.862 |
SKB52403.1 | SKB57625.1 | SAMN05660293_00740 | SAMN05660293_01154 | LPS export ABC transporter protein LptC. | Penicillin-binding protein 1A. | 0.862 |
SKB52403.1 | SKB75474.1 | SAMN05660293_00740 | SAMN05660293_01925 | LPS export ABC transporter protein LptC. | Penicillin-binding protein 2. | 0.566 |
SKB52403.1 | SKB75490.1 | SAMN05660293_00740 | SAMN05660293_01926 | LPS export ABC transporter protein LptC. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.407 |
SKB52403.1 | SKC09985.1 | SAMN05660293_00740 | SAMN05660293_04181 | LPS export ABC transporter protein LptC. | Cell division protein FtsW; Belongs to the SEDS family. | 0.407 |
SKB52403.1 | SKC10821.1 | SAMN05660293_00740 | SAMN05660293_04300 | LPS export ABC transporter protein LptC. | Cell division protein FtsI (penicillin-binding protein 3). | 0.634 |
SKB54433.1 | SKB52403.1 | SAMN05660293_00893 | SAMN05660293_00740 | Penicillin-binding protein 1A. | LPS export ABC transporter protein LptC. | 0.862 |
SKB54433.1 | SKB57625.1 | SAMN05660293_00893 | SAMN05660293_01154 | Penicillin-binding protein 1A. | Penicillin-binding protein 1A. | 0.783 |
SKB54433.1 | SKB75474.1 | SAMN05660293_00893 | SAMN05660293_01925 | Penicillin-binding protein 1A. | Penicillin-binding protein 2. | 0.940 |
SKB54433.1 | SKB75490.1 | SAMN05660293_00893 | SAMN05660293_01926 | Penicillin-binding protein 1A. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.854 |
SKB54433.1 | SKB84421.1 | SAMN05660293_00893 | SAMN05660293_02554 | Penicillin-binding protein 1A. | Sporulation related domain-containing protein. | 0.862 |
SKB54433.1 | SKC01386.1 | SAMN05660293_00893 | SAMN05660293_03604 | Penicillin-binding protein 1A. | Cell division initiation protein. | 0.952 |
SKB54433.1 | SKC09985.1 | SAMN05660293_00893 | SAMN05660293_04181 | Penicillin-binding protein 1A. | Cell division protein FtsW; Belongs to the SEDS family. | 0.804 |
SKB54433.1 | SKC10821.1 | SAMN05660293_00893 | SAMN05660293_04300 | Penicillin-binding protein 1A. | Cell division protein FtsI (penicillin-binding protein 3). | 0.925 |
SKB54433.1 | SKC16952.1 | SAMN05660293_00893 | SAMN05660293_05081 | Penicillin-binding protein 1A. | Penicillin-binding protein 1C. | 0.807 |
SKB54433.1 | murG | SAMN05660293_00893 | SAMN05660293_04180 | Penicillin-binding protein 1A. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.756 |
SKB57625.1 | SKB52403.1 | SAMN05660293_01154 | SAMN05660293_00740 | Penicillin-binding protein 1A. | LPS export ABC transporter protein LptC. | 0.862 |
SKB57625.1 | SKB54433.1 | SAMN05660293_01154 | SAMN05660293_00893 | Penicillin-binding protein 1A. | Penicillin-binding protein 1A. | 0.783 |
SKB57625.1 | SKB75474.1 | SAMN05660293_01154 | SAMN05660293_01925 | Penicillin-binding protein 1A. | Penicillin-binding protein 2. | 0.934 |
SKB57625.1 | SKB75490.1 | SAMN05660293_01154 | SAMN05660293_01926 | Penicillin-binding protein 1A. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.848 |
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