STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB57922.1PAP2 superfamily protein. (449 aa)    
Predicted Functional Partners:
SKB57884.1
Repeat domain-containing protein.
 
    0.776
SKC15039.1
Repeat domain-containing protein.
 
    0.776
SKB71055.1
Repeat domain-containing protein.
 
    0.774
SKB99749.1
Repeat domain-containing protein.
 
    0.774
SKB55086.1
Repeat domain-containing protein.
 
    0.773
SKB55435.1
Repeat domain-containing protein.
 
    0.773
SKB99757.1
Repeat domain-containing protein.
 
    0.773
SKB55050.1
Repeat domain-containing protein.
 
    0.770
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.722
SKC06898.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
     
 0.591
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.