STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB58499.1Dolichol-phosphate mannosyltransferase. (315 aa)    
Predicted Functional Partners:
SKB58493.1
D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily; Belongs to the membrane-bound acyltransferase family.
   
   0.804
SKC16605.1
Dolichol-phosphate mannosyltransferase.
  
     0.631
SKB58515.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.620
SKB58505.1
Hypothetical protein.
       0.615
SKB58510.1
Hypothetical protein.
       0.575
SKB58488.1
Co-chaperonin GroES (HSP10).
  
    0.555
SKB58476.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 
  0.539
SKB84878.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
     
 0.472
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
  0.457
SKB58481.1
Superfamily II DNA and RNA helicase.
       0.444
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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