STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB59012.1HmuY protein. (187 aa)    
Predicted Functional Partners:
SKB98798.1
Aspartate kinase.
    
  0.704
SKB58973.1
HmuY protein.
       0.655
SKB58956.1
Outer membrane receptor for ferrienterochelin and colicins.
       0.617
SKB93036.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.602
SKB59803.1
Hypothetical protein.
  
  0.601
SKC16716.1
Starch-binding associating with outer membrane.
  
  0.532
SKC19673.1
Hypothetical protein.
  
  0.530
SKB58203.1
SusD family protein.
  
  0.520
SKB79386.1
Starch-binding associating with outer membrane.
  
  0.516
SKB79317.1
Starch-binding associating with outer membrane.
  
  0.512
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.