STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB59954.1Hypothetical protein. (429 aa)    
Predicted Functional Partners:
SKB59965.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.773
SKB59941.1
Hypothetical protein.
       0.741
SKB59924.1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.668
SKB59910.1
Hypothetical protein.
       0.662
SKB59865.1
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
       0.551
SKB59882.1
N-acylneuraminate cytidylyltransferase.
       0.549
SKB59888.1
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase.
       0.549
SKB59899.1
Pseudaminic acid synthase.
       0.549
SKB59853.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
       0.538
SKB59970.1
Right handed beta helix region.
       0.482
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.