STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB68974.1Planctomycete cytochrome C. (919 aa)    
Predicted Functional Partners:
SKB68881.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
 0.997
SKC09872.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
  
 0.992
SKB68966.1
Protein of unknown function.
 
     0.953
SKB60261.1
Hypothetical protein.
 
  0.883
SKB68946.1
Sugar phosphate isomerase/epimerase.
 
  
  0.873
SKB51386.1
Cytochrome c.
 
 
 0.819
SKB68960.1
Planctomycete cytochrome C.
 
    
0.816
SKB76139.1
Protein of unknown function.
 
     0.774
SKB78385.1
Protein of unknown function.
 
     0.774
SKB82231.1
Protein of unknown function.
 
     0.774
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.