Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB44770.1 | SKB80295.1 | SAMN05660293_00231 | SAMN05660293_02231 | Adenylyltransferase and sulfurtransferase. | Ankyrin repeat. | 0.815 |
SKB44770.1 | SKC01378.1 | SAMN05660293_00231 | SAMN05660293_03603 | Adenylyltransferase and sulfurtransferase. | WD domain-containing protein, G-beta repeat-containing protein. | 0.821 |
SKB44770.1 | SKC05575.1 | SAMN05660293_00231 | SAMN05660293_03875 | Adenylyltransferase and sulfurtransferase. | WD40 repeat. | 0.844 |
SKB48155.1 | SKB80295.1 | SAMN05660293_00455 | SAMN05660293_02231 | DKNYY family protein. | Ankyrin repeat. | 0.808 |
SKB48155.1 | SKC01378.1 | SAMN05660293_00455 | SAMN05660293_03603 | DKNYY family protein. | WD domain-containing protein, G-beta repeat-containing protein. | 0.442 |
SKB48155.1 | SKC05575.1 | SAMN05660293_00455 | SAMN05660293_03875 | DKNYY family protein. | WD40 repeat. | 0.442 |
SKB48155.1 | rpsC | SAMN05660293_00455 | SAMN05660293_04536 | DKNYY family protein. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.529 |
SKB48155.1 | sbcD | SAMN05660293_00455 | SAMN05660293_04196 | DKNYY family protein. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.470 |
SKB80295.1 | SKB44770.1 | SAMN05660293_02231 | SAMN05660293_00231 | Ankyrin repeat. | Adenylyltransferase and sulfurtransferase. | 0.815 |
SKB80295.1 | SKB48155.1 | SAMN05660293_02231 | SAMN05660293_00455 | Ankyrin repeat. | DKNYY family protein. | 0.808 |
SKB80295.1 | SKB80314.1 | SAMN05660293_02231 | SAMN05660293_02232 | Ankyrin repeat. | Acetyl esterase/lipase. | 0.825 |
SKB80295.1 | SKB84724.1 | SAMN05660293_02231 | SAMN05660293_02571 | Ankyrin repeat. | DKNYY family protein. | 0.808 |
SKB80295.1 | SKC01378.1 | SAMN05660293_02231 | SAMN05660293_03603 | Ankyrin repeat. | WD domain-containing protein, G-beta repeat-containing protein. | 0.905 |
SKB80295.1 | SKC05575.1 | SAMN05660293_02231 | SAMN05660293_03875 | Ankyrin repeat. | WD40 repeat. | 0.907 |
SKB80295.1 | SKC14897.1 | SAMN05660293_02231 | SAMN05660293_04754 | Ankyrin repeat. | Hypothetical protein. | 0.839 |
SKB80295.1 | SKC17995.1 | SAMN05660293_02231 | SAMN05660293_05232 | Ankyrin repeat. | DKNYY family protein. | 0.808 |
SKB80295.1 | rpsC | SAMN05660293_02231 | SAMN05660293_04536 | Ankyrin repeat. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.905 |
SKB80295.1 | sbcD | SAMN05660293_02231 | SAMN05660293_04196 | Ankyrin repeat. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.870 |
SKB80314.1 | SKB80295.1 | SAMN05660293_02232 | SAMN05660293_02231 | Acetyl esterase/lipase. | Ankyrin repeat. | 0.825 |
SKB84724.1 | SKB80295.1 | SAMN05660293_02571 | SAMN05660293_02231 | DKNYY family protein. | Ankyrin repeat. | 0.808 |
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