STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB91888.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
SKB91878.1
Hypothetical protein.
 
     0.912
SKB91900.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
 
     0.909
SKB91894.1
phenylacetate-CoA ligase.
 
     0.899
SKB91848.1
Hypothetical protein.
 
     0.830
SKB91821.1
Butirosin biosynthesis protein H, N-terminal.
 
     0.825
SKB91830.1
Hypothetical protein.
 
     0.825
SKB91799.1
ABC-2 type transport system permease protein.
 
     0.823
SKB91871.1
Uncharacterized SAM-binding protein YcdF, DUF218 family.
 
     0.813
SKB91867.1
O-methyltransferase.
 
     0.803
SKB75647.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
     0.773
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.