STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB92207.1Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. (142 aa)    
Predicted Functional Partners:
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
   
 0.795
SKB45004.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
     0.768
SKC18129.1
Thioredoxin reductase (NADPH).
  
   
 0.702
SKB92210.1
FeS assembly SUF system protein.
  
    0.691
SKB69181.1
Bacillithiol biosynthesis deacetylase BshB1.
  
     0.687
SKB46036.1
Bacillithiol system protein YtxJ.
  
   
 0.655
SKB92203.1
Hypothetical protein.
 
     0.643
SKB92214.1
Cysteine desulfuration protein SufE.
       0.635
SKB91434.1
DinB superfamily protein.
  
     0.601
SKC15840.1
Hypothetical protein.
  
     0.553
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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