STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB92316.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
SKB55726.1
SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase).
  
     0.655
SKB56161.1
Protein of unknown function.
  
  
  0.614
SKB84390.1
Tetratricopeptide repeat-containing protein.
  
  
  0.589
SKB92327.1
Hypothetical protein.
       0.548
SKC01587.1
Protein of unknown function.
  
  
  0.524
SKC19387.1
Hypothetical protein.
  
     0.506
SKC18183.1
Hypothetical protein.
  
     0.493
SKC10857.1
Catechol 2,3-dioxygenase.
  
     0.466
SKC19431.1
Protein of unknown function.
  
     0.465
SKB53093.1
Protein of unknown function.
  
     0.458
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.