Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB72525.1 | SKB73724.1 | SAMN05660293_01721 | SAMN05660293_01807 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SKB72525.1 | SKB76818.1 | SAMN05660293_01721 | SAMN05660293_02007 | PAS domain S-box-containing protein. | CheB methylesterase. | 0.999 |
SKB72525.1 | SKB83447.1 | SAMN05660293_01721 | SAMN05660293_02471 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SKB72525.1 | SKB86143.1 | SAMN05660293_01721 | SAMN05660293_02683 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.999 |
SKB72525.1 | SKB92397.1 | SAMN05660293_01721 | SAMN05660293_02873 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SKB72525.1 | SKB94706.1 | SAMN05660293_01721 | SAMN05660293_03123 | PAS domain S-box-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.992 |
SKB72525.1 | SKB94715.1 | SAMN05660293_01721 | SAMN05660293_03124 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.881 |
SKB72525.1 | SKB94874.1 | SAMN05660293_01721 | SAMN05660293_03142 | PAS domain S-box-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.992 |
SKB72525.1 | SKC06337.1 | SAMN05660293_01721 | SAMN05660293_03949 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SKB72525.1 | SKC06878.1 | SAMN05660293_01721 | SAMN05660293_04004 | PAS domain S-box-containing protein. | Two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR. | 0.992 |
SKB73724.1 | SKB72525.1 | SAMN05660293_01807 | SAMN05660293_01721 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SKB73724.1 | SKB76818.1 | SAMN05660293_01807 | SAMN05660293_02007 | PAS domain S-box-containing protein. | CheB methylesterase. | 0.999 |
SKB73724.1 | SKB83447.1 | SAMN05660293_01807 | SAMN05660293_02471 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SKB73724.1 | SKB86143.1 | SAMN05660293_01807 | SAMN05660293_02683 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.999 |
SKB73724.1 | SKB92397.1 | SAMN05660293_01807 | SAMN05660293_02873 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SKB73724.1 | SKB94706.1 | SAMN05660293_01807 | SAMN05660293_03123 | PAS domain S-box-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.910 |
SKB73724.1 | SKB94715.1 | SAMN05660293_01807 | SAMN05660293_03124 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.895 |
SKB73724.1 | SKB94874.1 | SAMN05660293_01807 | SAMN05660293_03142 | PAS domain S-box-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.910 |
SKB73724.1 | SKC06337.1 | SAMN05660293_01807 | SAMN05660293_03949 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SKB73724.1 | SKC06878.1 | SAMN05660293_01807 | SAMN05660293_04004 | PAS domain S-box-containing protein. | Two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR. | 0.910 |
page 1 of 6