STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB95154.1Hypothetical protein. (259 aa)    
Predicted Functional Partners:
SKB95144.1
Sugar lactone lactonase YvrE.
 
  
  0.937
SKB70828.1
Cytochrome c.
 
  
  0.708
SKB81374.1
Cytochrome c.
 
  
  0.692
SKB93950.1
Cytochrome c.
 
  
  0.686
SKB95162.1
Hypothetical protein.
       0.671
SKB54019.1
Cytochrome c.
 
  
 
0.653
SKB44785.1
Xylan 1,4-beta-xylosidase.
  
  
  0.525
SKC09424.1
Cytochrome c.
  
  
 
0.512
SKB72315.1
Maltokinase.
   
    0.505
SKB95172.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
       0.468
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.