Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB84124.1 | SKB97461.1 | SAMN05660293_02524 | SAMN05660293_03236 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Winged helix DNA-binding domain-containing protein. | 0.407 |
SKB84956.1 | SKB97461.1 | SAMN05660293_02590 | SAMN05660293_03236 | Hypothetical protein. | Winged helix DNA-binding domain-containing protein. | 0.522 |
SKB97461.1 | SKB84124.1 | SAMN05660293_03236 | SAMN05660293_02524 | Winged helix DNA-binding domain-containing protein. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.407 |
SKB97461.1 | SKB84956.1 | SAMN05660293_03236 | SAMN05660293_02590 | Winged helix DNA-binding domain-containing protein. | Hypothetical protein. | 0.522 |
SKB97461.1 | ispD | SAMN05660293_03236 | SAMN05660293_03237 | Winged helix DNA-binding domain-containing protein. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | 0.651 |
SKB97461.1 | queA | SAMN05660293_03236 | SAMN05660293_03238 | Winged helix DNA-binding domain-containing protein. | S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.485 |
ispD | SKB97461.1 | SAMN05660293_03237 | SAMN05660293_03236 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | Winged helix DNA-binding domain-containing protein. | 0.651 |
ispD | queA | SAMN05660293_03237 | SAMN05660293_03238 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.646 |
queA | SKB97461.1 | SAMN05660293_03238 | SAMN05660293_03236 | S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Winged helix DNA-binding domain-containing protein. | 0.485 |
queA | ispD | SAMN05660293_03238 | SAMN05660293_03237 | S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | 0.646 |