STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB98438.1Response regulator receiver domain-containing protein. (147 aa)    
Predicted Functional Partners:
SKB92397.1
PAS domain S-box-containing protein.
 
 0.992
SKB72525.1
PAS domain S-box-containing protein.
 
 
 0.984
SKB52713.1
PAS domain S-box-containing protein.
 
 
 0.968
SKB83447.1
Signal transduction histidine kinase.
 
 
0.962
SKC17847.1
PAS domain S-box-containing protein.
 
 
 0.934
SKC06337.1
Signal transduction histidine kinase.
 
 
 0.932
SKB76775.1
Predicted ATPase.
 
 0.913
SKB86143.1
Response regulator receiver domain-containing protein.
 
 0.901
SKB77724.1
PAS domain S-box-containing protein.
 
 
 0.847
SKB98400.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
 
     0.838
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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