STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB99088.1Copper chaperone CopZ. (113 aa)    
Predicted Functional Partners:
SKB99116.1
Outer membrane receptor proteins, mostly Fe transport.
 
     0.903
SKB68909.1
Cu+-exporting ATPase.
  
 0.797
SKB72660.1
EcsC protein family protein.
  
 0.797
SKB81361.1
Cu2+-exporting ATPase.
  
 0.797
SKC06133.1
Cd2+/Zn2+-exporting ATPase.
  
 0.797
SKC20079.1
Cu2+-exporting ATPase.
  
 0.797
SKC20087.1
Cu2+-exporting ATPase.
  
 0.797
SKC20148.1
Cd2+/Zn2+-exporting ATPase.
  
 0.797
SKB99075.1
Hypothetical protein.
 
   
 0.785
SKB99097.1
Cu2+-exporting ATPase.
       0.740
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.