Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SKC00308.1 | SKC00319.1 | SAMN05660293_03501 | SAMN05660293_03502 | Biotin-requiring enzyme. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.801 |
| SKC00308.1 | SKC00330.1 | SAMN05660293_03501 | SAMN05660293_03503 | Biotin-requiring enzyme. | Hypothetical protein. | 0.558 |
| SKC00308.1 | SKC00350.1 | SAMN05660293_03501 | SAMN05660293_03505 | Biotin-requiring enzyme. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.511 |
| SKC00308.1 | pyrH | SAMN05660293_03501 | SAMN05660293_03500 | Biotin-requiring enzyme. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.641 |
| SKC00319.1 | SKC00308.1 | SAMN05660293_03502 | SAMN05660293_03501 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Biotin-requiring enzyme. | 0.801 |
| SKC00319.1 | SKC00330.1 | SAMN05660293_03502 | SAMN05660293_03503 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Hypothetical protein. | 0.611 |
| SKC00319.1 | SKC00350.1 | SAMN05660293_03502 | SAMN05660293_03505 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.572 |
| SKC00319.1 | glnS | SAMN05660293_03502 | SAMN05660293_00276 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | glutaminyl-tRNA synthetase. | 0.737 |
| SKC00319.1 | gltX | SAMN05660293_03502 | SAMN05660293_04624 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.750 |
| SKC00319.1 | panC | SAMN05660293_03502 | SAMN05660293_01369 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.721 |
| SKC00319.1 | proS | SAMN05660293_03502 | SAMN05660293_01764 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.899 |
| SKC00319.1 | pyrH | SAMN05660293_03502 | SAMN05660293_03500 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.743 |
| SKC00319.1 | trmB | SAMN05660293_03502 | SAMN05660293_02557 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.568 |
| SKC00319.1 | truA | SAMN05660293_03502 | SAMN05660293_00275 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.610 |
| SKC00330.1 | SKC00308.1 | SAMN05660293_03503 | SAMN05660293_03501 | Hypothetical protein. | Biotin-requiring enzyme. | 0.558 |
| SKC00330.1 | SKC00319.1 | SAMN05660293_03503 | SAMN05660293_03502 | Hypothetical protein. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.611 |
| SKC00330.1 | SKC00350.1 | SAMN05660293_03503 | SAMN05660293_03505 | Hypothetical protein. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.774 |
| SKC00330.1 | pyrH | SAMN05660293_03503 | SAMN05660293_03500 | Hypothetical protein. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.436 |
| SKC00350.1 | SKC00308.1 | SAMN05660293_03505 | SAMN05660293_03501 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Biotin-requiring enzyme. | 0.511 |
| SKC00350.1 | SKC00319.1 | SAMN05660293_03505 | SAMN05660293_03502 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.572 |
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