STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC10677.1Acyl-CoA dehydrogenase. (604 aa)    
Predicted Functional Partners:
SKC10803.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.998
SKB85503.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.997
SKB85493.1
Electron transfer flavoprotein beta subunit.
 
 0.996
SKC10654.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.990
SKB44433.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.977
SKB49182.1
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.947
SKC13976.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
 
 0.929
SKC12783.1
Enoyl-CoA hydratase/carnithine racemase.
 
 0.927
SKB97725.1
Long-chain acyl-CoA synthetase.
 
 
 0.892
SKB80896.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.805
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.