STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC13531.1Dipeptidyl aminopeptidase/acylaminoacyl peptidase. (773 aa)    
Predicted Functional Partners:
SKC13592.1
Protein of unknown function.
     0.873
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.703
SKC13543.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.650
SKC13547.1
Starch-binding associating with outer membrane.
 
     0.645
SKC06898.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
  0.610
SKC13538.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
    0.568
SKB77361.1
Alcohol dehydrogenase, class IV.
    
  0.445
SKC13526.1
Mn2+ and Fe2+ transporters of the NRAMP family.
       0.443
SKC13515.1
5-oxoprolinase (ATP-hydrolysing).
       0.437
SKC13557.1
Xaa-Pro aminopeptidase.
 
     0.402
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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