STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC18966.1Glycosyltransferase, GT2 family. (318 aa)    
Predicted Functional Partners:
SKC18065.1
UDP-galactopyranose mutase.
 
 
  0.872
SKB51077.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.833
SKC18868.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.833
SKC19004.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.832
SKC18970.1
Hypothetical protein.
       0.773
SKC18962.1
Polysaccharide transporter, PST family.
 
     0.718
SKC18972.1
Glycosyltransferase, GT2 family.
    
  0.580
SKC10345.1
Sugar transferase.
  
 
 0.566
SKC18975.1
Glycosyl transferase family 2.
 
  
  0.542
SKB73460.1
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
  
 
 0.447
Your Current Organism:
Dyadobacter psychrophilus
NCBI taxonomy Id: 651661
Other names: CGMCC 1.8951, D. psychrophilus, DSM 22270, Dyadobacter psychrophilus Zhang et al. 2010, Dyadobacter sp. BZ26, strain BZ26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.