STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY02407.13-hydroxybutyryl-CoA dehydrogenase. (221 aa)    
Predicted Functional Partners:
SDX64751.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.988
SDY16004.1
3-hydroxybutyryl-CoA dehydrogenase.
 
  
  0.977
SDX81976.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.949
SDY37373.1
Thiolase, C-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.932
SDX55759.1
3-hydroxybutyryl-CoA dehydrogenase.
 
  
 
0.929
SDY78345.1
Thiolase, C-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.920
SDX94415.1
3-oxoacid CoA-transferase subunit B.
  
 
 0.910
SDX94445.1
3-oxoacid CoA-transferase subunit A.
  
 
 0.908
SDX46881.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.907
SDY74269.1
glutaryl-CoA dehydrogenase.
  
 0.710
Your Current Organism:
Hymenobacter psychrophilus
NCBI taxonomy Id: 651662
Other names: CGMCC 1.8975, DSM 22290, H. psychrophilus, Hymenobacter psychrophilus Zhang et al. 2011, Hymenobacter sp. BZ33r, LMG 25548, LMG:25548, strain BZ33r
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