STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY08887.1Cupin domain-containing protein. (123 aa)    
Predicted Functional Partners:
SDY66021.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.846
SDY08859.1
Kazal-type serine protease inhibitor domain-containing protein.
       0.745
SDX38200.1
Transaldolase / glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.625
SDX83682.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.551
SDX32132.1
Glucosamine-6-phosphate deaminase.
     
 0.550
SDX83653.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.531
SDY21020.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.495
SDX79935.1
Capsular exopolysaccharide family.
  
 
 0.485
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.460
SDY08831.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
       0.450
Your Current Organism:
Hymenobacter psychrophilus
NCBI taxonomy Id: 651662
Other names: CGMCC 1.8975, DSM 22290, H. psychrophilus, Hymenobacter psychrophilus Zhang et al. 2011, Hymenobacter sp. BZ33r, LMG 25548, LMG:25548, strain BZ33r
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.