STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY60665.1Pyridine nucleotide-disulphide oxidoreductase. (444 aa)    
Predicted Functional Partners:
SDY20128.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
0.989
SDY60637.1
4Fe-4S binding domain-containing protein.
 
   
 0.902
SDY60692.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.822
SDY60608.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
     0.793
SDY88101.1
4Fe-4S binding domain-containing protein.
 
   
 0.783
SDX93516.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 
 0.763
SDY88299.1
Hypothetical protein.
  
     0.761
SDY93324.1
Hypothetical protein.
  
     0.736
SDY32715.1
Hypothetical protein.
  
     0.734
SDY84645.1
Hypothetical protein.
  
     0.696
Your Current Organism:
Hymenobacter psychrophilus
NCBI taxonomy Id: 651662
Other names: CGMCC 1.8975, DSM 22290, H. psychrophilus, Hymenobacter psychrophilus Zhang et al. 2011, Hymenobacter sp. BZ33r, LMG 25548, LMG:25548, strain BZ33r
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