STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY88199.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (496 aa)    
Predicted Functional Partners:
SDY88177.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.765
SDY88299.1
Hypothetical protein.
 
     0.691
SDY32715.1
Hypothetical protein.
 
  
  0.683
SDY60637.1
4Fe-4S binding domain-containing protein.
 
     0.678
SDY88101.1
4Fe-4S binding domain-containing protein.
 
     0.676
SDY60665.1
Pyridine nucleotide-disulphide oxidoreductase.
 
     0.635
SDX47676.1
Pyridine nucleotide-disulphide oxidoreductase.
 
     0.594
SDY60692.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.567
SDX36633.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
   
 
 0.559
SDX57099.1
Polysaccharide deacetylase.
   
 
 0.559
Your Current Organism:
Hymenobacter psychrophilus
NCBI taxonomy Id: 651662
Other names: CGMCC 1.8975, DSM 22290, H. psychrophilus, Hymenobacter psychrophilus Zhang et al. 2011, Hymenobacter sp. BZ33r, LMG 25548, LMG:25548, strain BZ33r
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.