STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY93871.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
SDY93895.1
DNA-binding transcriptional regulator, ArsR family.
       0.694
SDY93853.1
Predicted phosphodiesterase.
       0.594
SDY93833.1
Phosphinothricin acetyltransferase.
       0.539
SDY93918.1
Transposase and inactivated derivatives, TnpA family.
       0.495
SDY93814.1
Arsenite transporter, ACR3 family.
       0.464
rlmF
23S rRNA m(6)A-1618 methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.
  
     0.427
SDY15202.1
Hypothetical protein.
  
     0.412
SDY29609.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Hymenobacter psychrophilus
NCBI taxonomy Id: 651662
Other names: CGMCC 1.8975, DSM 22290, H. psychrophilus, Hymenobacter psychrophilus Zhang et al. 2011, Hymenobacter sp. BZ33r, LMG 25548, LMG:25548, strain BZ33r
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.